Looks like Project Abraham, getawarjob and America First America Only, three of the four Resistance 2 ARG sites, have been met their ends. There is nothing left on getawarjob, while Project Abraham left us a few clues. A letter in the inbox shows the Project has been stopped and moved from Alaska to Bryce Canyon facility, as well as an end letter from Dr. Aklin summarizing the work she has done. The last test subject, Kenneth Danby, was apparently released as well.
At America First America Only, a letter declaring "They've been on to us!" has been left behind. They are moving "further underground" and the last issue of their news letter, volume 7, is hidden away in their archives.